Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKGLKSLYTLLGLISLTLLGFVAVISKQHIYLPSFNWLDWDFNLPSPIDVGMYHYFFWGALVLFVIVLLAILVVLFYPRRYTEYKLADKTGKLMLKKSAIEGFVKTEVLKTGLMKSLSVTAHLYKKKVKVDVKGLLTSRTNVPEQLEHIQSDVELGLKEFFG-------LEKKMNTRVFVKQVEEENVGNAKTNKSRVE |
| 3GB8 Chain:A ((984-1048)) | ----------------------------------------------------------------------------------------------------------------------SAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLR-DFLVQIKEFAGEDTSDLFLEER---EIALRQADEEKHKRQMSVPGIFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5418 for 252 contacts (21.5/contact) +
2D Compatibility (PS) -6087 + (NN) -2611 + (LL) 10380
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: 2450.0 ( 9.72 by residue)
QMean score : 0.347
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