Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
1SR8 Chain:A ((35-60))
---DGYLRRGITTGTTASAAAVAAIASLKEKVEKVKVSTPAGVDVEVEVEAEKGFARV
General information:
TITO was launched using:
RESULT:
Template:
1SR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3998 for 88 contacts (-45.4/contact) +
2D Compatibility (PS) -2629 + (NN) 644 + (LL) 464
1D Compatibility (HY) 800 + (ID) 450
Total energy: -5169.0 ( -58.74 by residue)
QMean score : -0.236
(partial model without unconserved sides chains):
PDB file :
Tito_1SR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SR8-query.scw
PDB file :
Tito_Scwrl_1SR8.pdb
: