Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQ----VGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQD-EPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLVLRKNYEQYEF---LDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQ-------------YTNGLVGK------TRIVQALSQGK--AYADVR---GVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIV---------KQVTEAKIGTAEVSGMITRSVDQDNVSPV----GSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALN--EQYDQKQNFFLQIAGLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLLGAINP---DTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 1USH Chain:A ((26-530)) | ---------------------------YEQDKTYKITVLHTNDHHGHFWRN--------EYGEYGLAAQ-KTLVDGIRKEVAAEG--GSVLLLSGGDINTGVPESD--LQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQ--------------------QEKWAKFPLLSANIYQKSTGERLF--KPWAL----FKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ---ELQ-QTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKK----------RVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIG--ETNGRLEG--DRDKVRFVQTNMGRLILAAQMDRT-----GADFAVMSGGGIRDSI---EAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGK----------LNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKP--GYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1USH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135713 for 3825 contacts (-35.5/contact) +
2D Compatibility (PS) -48169 + (NN) -19329 + (LL) 12512
1D Compatibility (HY) -23200 + (ID) 6550
Total energy: -220449.0 ( -57.63 by residue)
QMean score : 0.427
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