Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKEDKVQ-LLFESYLLGMTNLSKDSSEFVSTIVMTH
1S12 Chain:A ((1-92))
MIKVTVTN------SFFEVTGHAPD-----KTLCASVSLLTQHVANFLKAEKKAKI----K-KESGYLKVKFEE----L-ENCEVKVLAAMVRSLKELEQKFPSQIRVEVIDN
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57724 for 621 contacts (-93.0/contact) +
2D Compatibility (PS) -9795 + (NN) -3996 + (LL) 1052
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -76813.0 ( -123.69 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: