Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTIPYPEVLRTYQEVASKIYGNPSSLHELGTTSSRILEASRKQIASLLELKANEIFFTSGGTEADNWVIKGL--AFEKQHFGN------HIIVSDIEHPAIKESAKWLGEYGF-EIDYAPVDD-KGFVDVEALVKLIKPETILISIMAINNEIGSIQPIKAISDLL---------SDKPTISFHIDAVQAIGKIPTKDYLTERVDFASFSSHKFHGVRGVGFLYIKEGKRISPL---LTGGGQESDLRSTTENVAGIAATAKALRMVMDKEVVAIPKISKMKTIIHDEL-----AKYEDITLFSGKEDFSPNIITFGIKG--VRGEVLVHAFEGHDIFISTTSACSSKAGKPAGTLIAMGISTKLAQTAVRISLDDDNDMGQVEQFLTIFKQVYEKTKKVRG |
| 3A9X Chain:A ((20-427)) | -VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRV-DVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERL-PNTCNFSIQGSQLRGYMVL--AQCQTLLASVGA------------------PVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171708 for 3055 contacts (-56.2/contact) +
2D Compatibility (PS) -37961 + (NN) -17713 + (LL) 1204
1D Compatibility (HY) -20000 + (ID) 5900
Total energy: -252078.0 ( -82.51 by residue)
QMean score : 0.428
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