Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVF-SLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVML-----VIAIIQGLAIAISFQYHNGFSLTKLLLATMILVT---GAYIISWIGNLNAEYGFG---------GMTILVVVGMLVGQFNNIPLIFELFQDGYQLAIILFLLWTLVAMYLMITFERSEYRIPVMRTSIHN-------RLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSY--NDYFSLSSIQG----VVIYMILMLVLSVAFTF-----VNIDPTKISEAMRESGDFIPNYRPGKET-----QSYLSKICYLFGTFSGF------FMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 1RH5 Chain:A ((59-409)) | ----------------------------------------------------WQTITA---SRIGTLITLGIGPIVTAGIIMQLLV----GSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPV-ILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRI------------SEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGG-------GTGVLLTVSIVYRMYEQLLRERT------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184311 for 2063 contacts (-89.3/contact) +
2D Compatibility (PS) -29696 + (NN) -6557 + (LL) 8624
1D Compatibility (HY) -29200 + (ID) 3750
Total energy: -244890.0 ( -118.71 by residue)
QMean score : 0.142
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