Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIETLTQKNHRSDSGRNHIVLFEPQIPANTGNIARTCAATNAPLHIIRPMGFPIDDKKMKRAGLDYWDKLDVSFYDSLEEFMLSCRGKVHLISKFADKVYSDENYNDDQDHYFMFGREDKGLPETFMREHA-EKALRIPMNDEHVRSLNVSNTVCMIVYEALRQQSFPNLELSHTYENDKLK
1J85 Chain:A ((4-150))
-------------------IVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPK-RLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMT-ANSRSMNLSNSVAVTVYEAWRQLGYKGAVNL---------
General information:
TITO was launched using:
RESULT:
Template:
1J85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65661 for 1076 contacts (-61.0/contact) +
2D Compatibility (PS) -15194 + (NN) -3639 + (LL) 1236
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -98658.0 ( -91.69 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_1J85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J85-query.scw
PDB file :
Tito_Scwrl_1J85.pdb
: