Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTMILIAIIALFVIWLIVAYNSLVRSRMHTKESWSQIDVQLKRRNDLIPNLIETVKGYAAYEGKTLEKIAELRAQVAKANTPAEAMTASNELTRQLSSILAVAENYPDLKANNSFVKLQEELTNTENKISYSRQLYNTTTSNYNVKLETFPSNIVGKLFGFKPSQFLETPEEEKEVPKVSFDF |
| 3PMK Chain:N ((6-32)) | --------------------------------------------------------------------------------------------------KVREYLKSYSRLD------QAVGEIDEIEAQRAEKS-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4042 for 91 contacts (44.4/contact) +
2D Compatibility (PS) -3084 + (NN) -2473 + (LL) 12432
1D Compatibility (HY) -800 + (ID) 200
Total energy: 9917.0 ( 108.98 by residue)
QMean score : 0.048
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