Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGK-VNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK
3HYK Chain:A ((14-118))
----------ELNRIEKMLD---KFMERILTENERNVAKGLKGS-RLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRNDDRGKPILITST-EHIVHLSISHSKEFAVAQVVLESSS
General information:
TITO was launched using:
RESULT:
Template:
3HYK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39968 for 710 contacts (-56.3/contact) +
2D Compatibility (PS) -11347 + (NN) -8347 + (LL) 1064
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -69098.0 ( -97.32 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3HYK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HYK-query.scw
PDB file :
Tito_Scwrl_3HYK.pdb
: