Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAFTSSKNYQNYLKNEKNQFKQ-TITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISS-LEHCAKLHFANTKKAQALLK |
3P83 Chain:D ((4-191)) | ------------------------------------------------------------------------------------GIDEAGKGCVIGPLVVAG--VACSDEDRLRKLGVKDSKKLSQGRREELAEEIRKICRTEVLKVSPENLDE------RMAAKTINEILKECYAEIILR--LKPEIAYVD---SPDVIPERLSRELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGD---FGSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLRQKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50790 for 1515 contacts (-33.5/contact) +
2D Compatibility (PS) -20517 + (NN) -11881 + (LL) 6096
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -87792.0 ( -57.95 by residue)
QMean score : 0.502
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