Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFTGLWIGFVTDALDTLGIGSFATTTTFFKLTKLVEDDRKIPATMTAAHVLPVLLQSLCFIFVVKVEALTLITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTLLITAAIIMLYRMITNPGAGISDSVHGLHGIWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLVTGGILGVIVAVLFL-TNLDLNSLKTLVVGIVLFTGAMLIRSSFKKTMPKSHH |
2YZV Chain:A ((256-282)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAVYGQLAGAYYGLGAIPGRWLRALHLREEMEALALALYRMSMAS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6788 for 94 contacts (-72.2/contact) +
2D Compatibility (PS) -2510 + (NN) 1107 + (LL) 22516
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 12925.0 ( 137.50 by residue)
QMean score : 0.212
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