Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEITWTVKYITEFIATAFLIILGNGAVAN--------VDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL |
3IYZ Chain:A ((41-253)) | ------------EFLAMLIFVLLSVGSTINWGGSNPLPVDM----------VLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTA----------------GHGLLVELIITFQLVFTIFASCD----------------DKRTD-------VTGSVALA---IGFSVAIGHLFAINYTGASMNPARSFGPAV--------IMGN------WENHWIYWVGPIIGAVLAGALYEYVFC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2404621 for 15931 contacts (-150.9/contact) +
2D Compatibility (PS) -17269 + (NN) 7467 + (LL) 4616
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -2412207.0 ( -151.42 by residue)
QMean score : ?
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