Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRTYQPSKIRRQRKHGFRHRMSTKNGRRVLASRRRKGRKVLSA
1VQ8 Chain:M ((42-70))-----RPTRLDKARSQGYKA----KQGVIVARVSVRKGSARKRR


General information:
TITO was launched using:
RESULT:

Template: 1VQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4075 for 106 contacts (38.4/contact) +
2D Compatibility (PS) -3239 + (NN) -2693 + (LL) 848
1D Compatibility (HY) -800 + (ID) 450
Total energy: -2259.0 ( -21.31 by residue)
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_1VQ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VQ8-query.scw
PDB file : Tito_Scwrl_1VQ8.pdb: