Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYYLSIDYGGTNTKALIFDKLGHQIAVSSFETLKNETQSGHRQVNLVKTWNAITSAIREVIQISKLSPEQISAVACIG--HGKGLYLLDNKL--EPLEQGILSTDNRAKDLAQYFESKLDN--IWELTRQHIFPSQSPVILRWLKDYQPETYKSI----GAVLSAKDFIRYKLT-GKVQQEYGDASGNHWINFQTGTYDPAILDFFGIREIENSLPELIDSADLVPGGISSQAAKETGLVEGTPVVGGLFDIDACALGSGVLESDTFSVISGT---WNINTYPSLKPAKQDSGLMTSY---FPDR---RYLLEASSPTSAGNLNFMLKMLMHQEIDNAKSSGGSIYDNLEEFLTHTDATHHGLIFFPF---LYGSNTSQDASACFFGLTTKSTKSQMIRAVYEGIAFAHKQHITDLIKSRG-SVPKIIRFSGGATNSPAWMQMFSDILNFPIETVEGTELGGLGGAILARHALDKISLKEAVQDMVRVKAIYKPQLSEVKGYKKKYHAYQKLLETLDPIWSELGHLNK |
| 2W40 Chain:A ((3-470)) | MNVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSV-IIKCIGITNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLTKGNCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNM-SVLPEIKSNCSNF-GLVKSEHVPD---YLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINT--GEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTAGSGVSWLLK---NKLIDDP-SEASDIMEKCEN--------TTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRRSDAVFHSKMDDKKRKKKTSEWNKAVERTLIQL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186555 for 3971 contacts (-47.0/contact) +
2D Compatibility (PS) -46407 + (NN) -11661 + (LL) 1916
1D Compatibility (HY) -33200 + (ID) 5700
Total energy: -281607.0 ( -70.92 by residue)
QMean score : 0.440
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