Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEV----NALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK---PL-KPEDILVSAVDD-----ETDYHTRRALVAETTL--NDKVVTVVSLHLSWF-EKGFAEEWKRLETTLLE--VETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLSISSSQVVFEGGEAPVVSDHYGLEITMDF |
| 3L1W Chain:A ((1-251)) | -MKIATYNVRVDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLK-------------------------AY---TTFTCLSA--ER--EGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAGCPRIALWGLFKETTQNTPFLVINVHLDHISAHARLAGMTVILEELHDKIAQYPTLLMGDFNAESGEEVHQLVQK-K--FQDSKNLATHYGPRGTFQNF-TYTKPWAELEEIDYIYVKG-WQVQQTASLTDSIDGRFPSDHFPLEAEVAG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113736 for 1944 contacts (-58.5/contact) +
2D Compatibility (PS) -25211 + (NN) -4585 + (LL) 2548
1D Compatibility (HY) -7200 + (ID) 2350
Total energy: -150534.0 ( -77.44 by residue)
QMean score : 0.423
|
|
|