Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGIIDA-ELAHSVILQESKKMKQLVDDIILLSKLDSNLSDQKDEFSLNELLNSII--AYFKPLANKQKISITYRPDKHEKLLKGNEELIQRAINNILSNALRYAVSHIEISYTNQK----LTISNDGPAISKEDLPYIFDRFYKG------HGGQTGIGLAMTKEIIKQHHGNIIAESDSTSTTFTIYFNCHKIA |
4BIZ Chain:A ((79-279)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQQRLLSDISEELRTPLTRLQLGTALLRRRSGESKELER--IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWP--LYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62107 for 1215 contacts (-51.1/contact) +
2D Compatibility (PS) -19506 + (NN) -1774 + (LL) 20632
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -77655.0 ( -63.91 by residue)
QMean score : 0.375
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