Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNEKLEQIEQLLQTLIKLIQIKEQNIPLKIIQQRELLKQLNISPNTLKTWEQKG-----LKRLEPPIEGTRTVFYLLDDIINFLQS
2WGN Chain:B ((15-55))
---------------------------PLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNSEEDSGLVGSGGESTW
General information:
TITO was launched using:
RESULT:
Template:
2WGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5353 for 103 contacts (-52.0/contact) +
2D Compatibility (PS) -3706 + (NN) -160 + (LL) 3128
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -9291.0 ( -90.20 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_2WGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WGN-query.scw
PDB file :
Tito_Scwrl_2WGN.pdb
: