Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFYIIDDDPTITMILQDIIEEDFNNTVVRVNNV--SSKAYNELLIADVDIVLIDLLMPILDGVTLVQKIYKQRSDLKFIMISQVKDNDLRQEAYKAGIEFFINKPINIIEVKSVVKRVTDTIEMQKKLNTIQNLLENTPSYQKPITTSNLTKIRSILSYLGITSETAYTDILNICELLLKQELNFAQFDFQKELSIDEHQQKIILQRIRRAVKKAMINMAHLYIDDFENELTLQYANALFGFQNIHNEAQLIQGKSMYGGKISLKHFFDELILQSKTF |
2TMY Chain:A ((4-105)) | -RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL---KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKVS--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2TMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75380 for 760 contacts (-99.2/contact) +
2D Compatibility (PS) -10767 + (NN) -3595 + (LL) 14432
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -84160.0 ( -110.74 by residue)
QMean score : 0.676
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