Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYHFSAV-AITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTERGH---LPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
1O3R Chain:A ((21-197))
----------------------------------------TLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQ-PDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG---------
General information:
TITO was launched using:
RESULT:
Template:
1O3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96308 for 1169 contacts (-82.4/contact) +
2D Compatibility (PS) -18686 + (NN) -6753 + (LL) 4080
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -129567.0 ( -110.84 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1O3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O3R-query.scw
PDB file :
Tito_Scwrl_1O3R.pdb
: