Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGENMFKKEKVTEYIWTILIPTIITFIISWVGSYYNGTSTVSIGQPTKVSGQYITPINISPYHDIKELRITFPQKLDVKQISSNEPINVKSDKNNIGVESNSTFEIAKIVENNSVQLLITTQKKLNDKEIRIDKNGNNISVNYESQIVNPAKKQLINLIITSSIYFIMLNILALIMNKRWDKYYAKMKNEIKEFEDNAKDLDKKSKKKSEELSELRKTLNQAFEETDRIKYHEKKKQILLLAKLNDYKKELTFWRNTIRKVLYELPDGDKKADKLIGTVTSSLKTYGTVEKNEHDYESLKVAAALLNDSDKRS
3U2K Chain:A ((53-171))----------------------------------------------------------------------------------------------------------------NQIEVVIE-----KDNWIKVTDNGRGIPVDIQEKMGRPA----VEVILTSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQF-----DLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLN--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3U2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 460 -13944 -30.31 -117.18
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -30.31
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.069

(partial model without unconserved sides chains):
PDB file : Tito_3U2K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U2K-query.scw
PDB file : Tito_Scwrl_3U2K.pdb: