Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIDSIDFQILQLLNKNARIQWKEIGEKIHMTGQAVGNRIKKMEDNGIIKAYSIVVDELKMGFSFTAFVFF-FMNAYMHDDLLKFIATRNEISEAHRVSGDACYLLKVTVHSQEVLNHLLNDLLKYGNYQLYLSIKEVKKHYNTSLMSDE
2VBW Chain:B ((5-137))--LDDIDRILVRELAADGRATLSELATRAGLSVSAVQSRVRRLESRGVVQGYSARINPEAVGHLLSAFVAITPLDPSQPDDAPARLEHIEEVESCYSVAGEESYVLLVRVASARALEDLLQRIRTTANVRTRSTI---------------


General information:
TITO was launched using:
RESULT:

Template: 2VBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 448 -106101 -236.83 -803.80
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -236.83
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_2VBW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VBW-query.scw
PDB file : Tito_Scwrl_2VBW.pdb: