Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFSPQQPMRNYPQPGPPRPMPNQRMMGRRPPNMRGPSFGAQQQGFQQAGQFLPQANAGARNGAGAGGGLK---GMLSRFLPGGGGAGSAGVPGIPGAGAAASGGAGLQGIQNIANPASLSSMLGNVQKVLGMAQQVTPMIQQYGPLVRNLPAMMKLYSQLSKSDDTETEANEESEKQSVSEESSEKEKETETKTSDGNKKSKPKSSSLPKKSKTTDNKEQELKTSAPKKKEAASPAPKRTSGSSKPRLYI
4D7U Chain:A ((143-198))------------------------------------------------GQYLMRAELIALHNAGSQAGAQFYIGCAQINVTGGGSASPSNTVSFPGAYSASDPG--------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 79 -1230 -15.57 -23.21
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -15.57
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.038

(partial model without unconserved sides chains):
PDB file : Tito_4D7U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D7U-query.scw
PDB file : Tito_Scwrl_4D7U.pdb: