Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKTKTAFMAILFSLITVLSACGAGSQTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKRLPHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKSKEREKKFLFNKVAYNHFPLKITVLQNNDTIRGIEDLKGKRVITSATSNGALVLKKWNEDNGRPFEIAYEGQGANETANQLKSGRADATISTPFAVDFQNKTSTIKEK------TVGNVLSNAKVYFMFNKNEQTLSDDIDKALQEIIDDGTLKRLSLKWLGDDYSKEQY 3VVD Chain:A ((33-256)) --------------------------------KRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERL-GLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTN---PHYCTGGVIVSRKGGPRTAKDLQGKVV---GVQVGTTYMEAAQKIPGIKEVRTY--QRDPDALQDLLAGRIDTWITDRFVA-----KEAIKERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGED------

General information: TITO was launched using: RESULT: Template: 3VVD.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1177 -41867 -35.57 -192.05 target 2D structure prediction score : 0.55 Monomeric hydrophicity matching model chain A : 0.72 3D Compatibility (PKB) : -35.57 2D Compatibility (Sec. Struct. Predict.) : 0.55 1D Compatibility (Hydrophobicity) : 0.72 QMean score : 0.461

(partial model without unconserved sides chains): PDB file : Tito_3VVD.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3VVD-query.scw PDB file : Tito_Scwrl_3VVD.pdb: