Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRFAIIGTNWITDRFLESAADIEDF-QLTAVYSRSAERAGEFAAKHNAAHAFSDLQEMAASDCFDAVYIASPNALHKEQAVLFMNHGKHVLCEKPFASNTKETEEMISAAKANGVVLMEAMKTTFLPNFKELKKHLHK--IGTVRRFTASYCQYSSRYDAFRSGTVLNAFQPELSNGSLMDIGVYCIYPAVVLFGAPKDVKANGYALSSGVD-----GEGTVILSYDGFEAVL---MHSKISTSYAPAEIQGEDGTIVIDTIHRPERVEIRYRDGRLENIAIPDPKPAMFYEAEEFVTLIKENKLESEENTFERSLTTAKIMEEARKQMGIVYPADQA
3RC2 Chain:A ((28-279))-IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGG-EPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAASFTIPPKP----------------VGGGALLDIGVYPIRAAGLFLGA--DLEFVGAVLRHERDRDVVVGGNALLTTRQGVTAQLTFGMEHAYTNNY---EFRGSTGRLWMNRVFTP-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1133 -50845 -44.88 -219.16
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -44.88
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_3RC2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RC2-query.scw
PDB file : Tito_Scwrl_3RC2.pdb: