Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
2ITA Chain:A ((36-64))
---------------------------------------------------------------------GVFFGTLLLIGFFRVVGRMLPIQENQAPA------------
General information:
TITO was launched using:
RESULT:
Template:
2ITA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3516 for 120 contacts (-29.3/contact) +
2D Compatibility (PS) -2519 + (NN) 2056 + (LL) 6656
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -1623.0 ( -13.53 by residue)
QMean score : 0.129
(partial model without unconserved sides chains):
PDB file :
Tito_2ITA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ITA-query.scw
PDB file :
Tito_Scwrl_2ITA.pdb
: