Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTRFIRRQLILFAIVSVVAIVVLGWYYLRIPSLVGIGQYTLKADLPASGGLYPTANVTYRGITIGKVTAVEPTDQGARVTMSIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDNSNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSGPILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLPQTLANLEVVFDMLKRYHAGVEQLLVFLPQGAAIAQTVLTPTPGAAQLPLAPAINYPPPCLTGFLPASEWRSPADTSPRPLPSGTYCKIPQDAQLQVRGARNIPCVDVLGKRAATPKECRSKDPYVPLGTNPWFGDPNQILTCPAPGARCDQPVKPGLVIPAPSINTGLNPAPADQVQGTPPPVSDP---LQRPGSGTVQCNGQQPNPCVYTPTSGPSAVYSPASGE---LVGPDGVKYAVANSSTTGDDGWKEMLAPAS |
3A72 Chain:A ((243-309)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDPENIASAPGQRLVVSSGTQP-------TSSPYAVWTPYGGENGTIIVSSGTQGTLFINKALGEGEWTEIPCP-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 10385 for 313 contacts (33.2/contact) +
2D Compatibility (PS) -6425 + (NN) -3267 + (LL) 23588
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: 21981.0 ( 70.23 by residue)
QMean score : 0.481
|
|
|