Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMALTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAIGPWRLLVRDLAHLVDTLSLFVGWLWPLWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRLTAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGPKLVVDVLSYDPETVQRDFERARSLATDRYRPQLSIQQDS--V---RESGPVRNQYWVTDSAVLSAT----PA--QATMLLFMQGE-RGTPPNQRYIQSTVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK |
| 3WZ3 Chain:A ((5-123)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WSQNDAMAFGSQALATAFNLDFVHYRSQISSLSPRFSDEGFAGYVNALQASNILETIKKEKMNLTAT-TGAGVLVRQGQMSDGVWFWTFQYPVRMRLVGQTTSKPEQSFVFEITIQRVDP-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10602 for 612 contacts (17.3/contact) +
2D Compatibility (PS) -10381 + (NN) 3480 + (LL) 17948
1D Compatibility (HY) 400 + (ID) 400
Total energy: 21649.0 ( 35.37 by residue)
QMean score : 0.044
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