Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSTNNLTPSSLREAFGHFPTGVVAIAAEVDGVRQGLAASTFVPVSLEPPLVSFCVQNTSTTWPKLTGVPMLGISVLG-EAHDAAVRTLAAKTGDRFAGLETVSNDAGAVFIKGTSVWLESAIEQLVPAGDHTIVVLRVNQVKV-DPNVAPIVFHRSVLRRLGV
4XHY Chain:A ((28-168))
-----------LREALGRFATGVTVVTTAGPQGPLGMTVNSFSSVSLEPPLVLWCPARTSARHAAFAEAGAWSVHVLGSEQLETCLRF--TRGGRQFEGLDTVLTPEGVPVIPGVAARFDCAAHAAHEAGDHSVLIGRVLRVTVAGPGDHPLVF----------
General information:
TITO was launched using:
RESULT:
Template:
4XHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86063 for 1020 contacts (-84.4/contact) +
2D Compatibility (PS) -15299 + (NN) -4886 + (LL) 1224
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -114674.0 ( -112.43 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_4XHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XHY-query.scw
PDB file :
Tito_Scwrl_4XHY.pdb
: