Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASTLTTGLPPGPRLPRYLQSVL-YLRFREWFLPAMHRKYGDVFSLRVPPYADN---LVVYTRPEHIKEIFAADPRSLHAGEGNH-ILGFVMGEHSVLMTDEAEHARMRSLLMPAFTRAALRGYRDMIASVAREHITRWRPHAT----INSLDHMNALTLDIILRVVFGVT--------DPKVKAELTSRLQQIINIHPAILAGVPYPSLKRMNPWKRFFHNQTKIDEILYREIA---SRRIDSDLTARTDVLSRLLQTKDTPTKPLTDAELRDQLITLLLAGHETTAAALSWTLWELAHAPEIQS--QVVWAAVGGDDG-----------FLEAVLKEGMRRHTVIASTARKVTAPAEIGGWRLPAGTVVNTSILLAHASEVSHPKPTEFRPSRFL---DGSVAPNTWLPFGGGVRRCLGFGFALTEGAVILQEIFRRFTITAAGPSKGETPLVRNITTVPKHGAHLRLIPQRRLGGLGDSDPP |
| 4K9V Chain:A ((19-452)) | ----------PGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWG-----FYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV--ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDT----VDFLQLMIDSQ-----ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185391 for 2923 contacts (-63.4/contact) +
2D Compatibility (PS) -42003 + (NN) -25229 + (LL) 2304
1D Compatibility (HY) -32000 + (ID) 5350
Total energy: -287669.0 ( -98.42 by residue)
QMean score : 0.399
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