Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRSGSLIAPIALHWS----LNGMGALAAALVWHLST |
3TDA Chain:A ((34-72)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YCFDQLRRRFGDVFS-LQLAWTPVVVLNGLAAVREALVTH--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11924 for 153 contacts (-77.9/contact) +
2D Compatibility (PS) -3717 + (NN) 475 + (LL) 18704
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -2062.0 ( -13.48 by residue)
QMean score : -0.036
|
|
|