Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPL-----------ARTQPALDLDALIGGFKP---LFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK |
| 3LRJ Chain:A ((121-194)) | -------------------------------------------------------------------------------------------------------------AIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTL-AGFKPAGVLCELTNDDGTMARAPECI-AFAGQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LRJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4155 for 239 contacts (-17.4/contact) +
2D Compatibility (PS) -6635 + (NN) -3924 + (LL) 19892
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: 728.0 ( 3.05 by residue)
QMean score : -0.057
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