Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHE-----AQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFE-HLYSESMMLVVRPGHPLLAAPLGDLQRLAEFPLVLPLAGTTIRRHADSLFVQWGIA----LAGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH |
| 2UYE Chain:A ((88-300)) | -------------------------------------------------------------DSFDPFASTRTFNLAMTDIGEMSVMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLL---PELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMS-LKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIAT----VPQRFAVRCEVPFG-LTTSPHPAKLPDIAINLFWHAKYNRDPGNMWLRQLFVELFSEAH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140983 for 1535 contacts (-91.8/contact) +
2D Compatibility (PS) -21834 + (NN) -6654 + (LL) 5196
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -178675.0 ( -116.40 by residue)
QMean score : 0.367
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