Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLERIARISDGFQSMAREQNLSLSERYHKQLRRLEKVARISDRYQQMMRDLNLALKEASIRDPLTGLPNRRMLLERLREENERSQRHGQSYVLAMLDVDFFKQVNDTWGHDSGDRVLVEIARAMESELREYDLCGRWGGEEFLLLLPQTRLQDAGPVLERVRDSVRTLAVRVGTEALSVTASVGVTEH-RIGETYSQTVNRADAALLDAKRSGRDKCVFAALPPLPAPSRPAPAR
4URG Chain:A ((2-149))
--------------------------------------------------------------DPLTGLPNRRYFFELGNRYLDLAKREGKKVFVLFVDLAGFKAINDTYGHLSGDEVLKTVSKRILDRVRRSDVVARYGGDEFTILLYDMKEEYLKSLLERILSTFRE-PVRVENKHLSVTPNIGVARFPEDGENLEELLKVADMRMYKAKE------------------------
General information:
TITO was launched using:
RESULT:
Template:
4URG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79332 for 1112 contacts (-71.3/contact) +
2D Compatibility (PS) -15949 + (NN) -5135 + (LL) 6860
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -109456.0 ( -98.43 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_4URG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4URG-query.scw
PDB file :
Tito_Scwrl_4URG.pdb
: