Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
1UTX Chain:A ((6-66))
----LKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24268 for 372 contacts (-65.2/contact) +
2D Compatibility (PS) -6816 + (NN) -5246 + (LL) 7896
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -33334.0 ( -89.61 by residue)
QMean score : 0.821
(partial model without unconserved sides chains):
PDB file :
Tito_1UTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UTX-query.scw
PDB file :
Tito_Scwrl_1UTX.pdb
: