Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF |
3NB3 Chain:A ((118-132)) | --------------------------------------------------------------------------------------------------------------------------------------GVSPVFAGGVEYAITPEIATRLEYQWTNGMLSLGVSYRFG------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 0 for 27 contacts (0.0/contact) +
2D Compatibility (PS) -1725 + (NN) -907 + (LL) 12436
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 8504.0 ( 314.96 by residue)
QMean score : 0.031
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