Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTAISQTAYNYKVVRQFAVMTVVWGVIGMGLGVLIAAQLVWPELNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYVVQRTSQARLISDTLAAFTFWGWQAVIVGAVLTLPQGFTTSKEYAELEWPLAILLAIVWITYAIVFFGTIVKRKVKHIYVGNWFYGAFILVTAMLHIVNHMSLPVSWFKSYSAYSGATDAMVQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPVYSYRLSIVHFWALISLYIWAGPHHLHYTA--LPDWAQSLGMVMSLILLAPS------------WGGMINGMMTLSGAWHKLRTD-PILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPKVFGRP---QMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAVNEDGTLTYSFVEALVASHPGFIVRMI----GGGFFLTGMLLMAYNTWRTV--RAAKPAEYEAAAQIA |
| 1XME Chain:A ((235-515)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WWTGHPIVYFWLLPAY-AIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTW-KMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGL--AVVWLWFLGMMI---------MAVGLHWAGLLNVPRRAY--IAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSRERKPELAEAPLPFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146290 for 1894 contacts (-77.2/contact) +
2D Compatibility (PS) -25226 + (NN) 969 + (LL) 19824
1D Compatibility (HY) -18400 + (ID) 3750
Total energy: -172873.0 ( -91.27 by residue)
QMean score : 0.260
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