Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQHLVSDE
4ZAZ Chain:A ((1-207))
MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFFHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQHLVS--
General information:
TITO was launched using:
RESULT:
Template:
4ZAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178745 for 1685 contacts (-106.1/contact) +
2D Compatibility (PS) -22439 + (NN) -17432 + (LL) 28
1D Compatibility (HY) -29200 + (ID) 10300
Total energy: -258088.0 ( -153.17 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_4ZAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZAZ-query.scw
PDB file :
Tito_Scwrl_4ZAZ.pdb
: