Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRVHVAAAVIRGSDGRVLIARRPEDKHQGGLWEFPGGKVEDGEPVRAALARELEEELGIRVERARPLIQVRHDYADKHVLLDVWEVDGFSGEAHGAEGQPLAWVEPRELADYEFPAANAPIVQAARLPAHYLITPDGLEPGELISGVRKAVEAGIRLIQLRAPNMFSPEYRDLAIDIQGLCAGKAQLMLKGPLEWLGDFPAAGWHLTSAQLRKYASAGRPFPEGRLLAASCHDAEELALAASMGVEFVTLSPVQPTESHPGEPALGWDKAAELIAGFNQPVYLLGGLGPQQAEQAWEHGAQGVAGIRAFWPGGL |
3EF5 Chain:A ((24-141)) | -----VVAGFLR-KDGKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGILILFYEILYWKGEPRAKHHMMLEWIHPEELKHRNIPEANRKILH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53528 for 823 contacts (-65.0/contact) +
2D Compatibility (PS) -12764 + (NN) -7381 + (LL) 11932
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -74141.0 ( -90.09 by residue)
QMean score : 0.619
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