Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEYLRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL |
| 3N3F Chain:A ((24-46)) | ---------------------------------------------------------------------------------------------------------------------------------------------FIYLRDSTEFFIR----------VRDGWKKLQL----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7231 for 94 contacts (-76.9/contact) +
2D Compatibility (PS) -2120 + (NN) 2105 + (LL) 13100
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 3254.0 ( 34.62 by residue)
QMean score : -0.292
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