Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA
2Q9S Chain:A ((25-155))
-CDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDLVTIRSESTFKNTEISFKLGVEFDEITADDRKVKSIITLDGGALVQVQKWDGKSTTIKRKRDGDKLVVECVMKGVTSTRVYERA
General information:
TITO was launched using:
RESULT:
Template:
2Q9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40995 for 937 contacts (-43.8/contact) +
2D Compatibility (PS) -14704 + (NN) -3052 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 5950
Total energy: -81293.0 ( -86.76 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2Q9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q9S-query.scw
PDB file :
Tito_Scwrl_2Q9S.pdb
: