Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
2WUT Chain:A ((8-133))
--------GTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKMKGVVCTRIYEKV-
General information:
TITO was launched using:
RESULT:
Template:
2WUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30132 for 899 contacts (-33.5/contact) +
2D Compatibility (PS) -14435 + (NN) -3956 + (LL) 1220
1D Compatibility (HY) -12800 + (ID) 3700
Total energy: -63803.0 ( -70.97 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2WUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUT-query.scw
PDB file :
Tito_Scwrl_2WUT.pdb
: