Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLVLAVLLTVGAAQEGISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
2B04 Chain:A ((1-124))
----------------------ALWQFRSMIKCAIPG------FNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
2B04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66662 for 846 contacts (-78.8/contact) +
2D Compatibility (PS) -12715 + (NN) -7154 + (LL) 2480
1D Compatibility (HY) -16800 + (ID) 5900
Total energy: -106751.0 ( -126.18 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2B04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B04-query.scw
PDB file :
Tito_Scwrl_2B04.pdb
: