Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAAEEEPKPKKLKVEAPQALRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQP--TGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNS-KRQRIVIFTQGRDDTIM--ATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH |
| 4DC3 Chain:A ((24-366)) | --------------------LSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPF-VCSYVGCIGADIQGKYIKNDCSALDLVTEF-QIAEEPLMTGKVAVLVS---RSMVTYLGAA-CDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIID--GAGDAFAAGFIADYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRDSY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213930 for 2970 contacts (-72.0/contact) +
2D Compatibility (PS) -35205 + (NN) -11119 + (LL) 1432
1D Compatibility (HY) -30400 + (ID) 6500
Total energy: -295722.0 ( -99.57 by residue)
QMean score : 0.599
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