Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVP--LDALERIHRHKTGALIRAAVRLGA-LSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK |
4LLT Chain:A ((24-310)) | --FTQRLDAAAAAVQAHFDKVLAA--FEPLPIVEAMAH-ATSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPG-ASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTA-----ALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARARAMSLIDEACDSLATYGAKA-DT--LRETARFVVRRT- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130219 for 2430 contacts (-53.6/contact) +
2D Compatibility (PS) -31074 + (NN) -16483 + (LL) 940
1D Compatibility (HY) -18400 + (ID) 6500
Total energy: -201736.0 ( -83.02 by residue)
QMean score : 0.462
|
|
|