Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVPEPGPTANSTPAWGAGPPSAPGGSGWVAAALCVVIALTAAANSLLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLARGLCLLWTAFDVMCCSASILNLCLISLDRYLLILSPLRYKLRMTPLRALALVLGAWSLAALASFLPLLLGWHELGHARP----PVPGQCRLLASLPFVLVASGLTFFLPSGAICFTYCRILLAARKQAVQVASLTTGMASQASETLQVPRTPRPGVESADSRRLATKHSRKALKASLTLGILLGMFFVTWLPFFVANIVQAVC-DCISPGLFDVLTWLGYCNSTMNPIIY---PLFMRDFKRALGRFLPCPRCPRERQASLASPSLRTSHSGPRPGLSLQQVLPLPLPPDSDSDSDAGSGGSSGLRLTAQLLLPGEATQDPPLPTRAAAAVNFFNIDPAEPELRPHPLGIPTN
2Y04 Chain:A ((18-300))--------------------------------MALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ----------------------------------SRVMLMREHKALK---TLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSP----DFRKAFKRLLA--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Y04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -243184 for 1921 contacts (-126.6/contact) +
2D Compatibility (PS) -26865 + (NN) -12225 + (LL) 5380
1D Compatibility (HY) -32000 + (ID) 5350
Total energy: -314244.0 ( -163.58 by residue)
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_2Y04.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y04-query.scw
PDB file : Tito_Scwrl_2Y04.pdb: