Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLGLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGIS-VAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPDMVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVRLRPAGQ-----------GRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEMTGMNDLGERQSENYPNKEDVGNKSA
5C1M Chain:A ((24-294))----------------------------------------------------YSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVM-FMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCY---GLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNS------CLNPVLYAFLDENFKRCF-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -238100 for 1937 contacts (-122.9/contact) +
2D Compatibility (PS) -26359 + (NN) -10236 + (LL) 8408
1D Compatibility (HY) -33600 + (ID) 3900
Total energy: -303787.0 ( -156.83 by residue)
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_5C1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C1M-query.scw
PDB file : Tito_Scwrl_5C1M.pdb: