Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSTNSSNNSLALTSPYKTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFIL-WAPAILFWQFIVGVRTVEDGECYIQ-----FFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRIKKDKKEPVANQDPVSPSLVQGRIVKPNNNNMPSSDDGLEHNKIQNGKAPRDPVTENCVQGEEKESSNDSTSVSAVASNMRDDEITQDENTVSTSLGHSKDENSKQTCIRIGTKTPKSDSCTPTNTTVEVVGSSGQNGDEKQNIVARKIVKMTKQPAKKKPPPSR--EKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYWLCYINSTINPACYALCNA-TFKKTFKHLLMCHYKNIGATR |
| 3P0G Chain:A ((41-476)) | ----------------------VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAI---NCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVY--------SRVFQEAK---------------------------------------------------------------------------------------------------------------------------------------------------------------LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIY--CRSPDFRIAFQELLCLRR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256375 for 1954 contacts (-131.2/contact) +
2D Compatibility (PS) -25798 + (NN) -1069 + (LL) 6904
1D Compatibility (HY) -31200 + (ID) 4200
Total energy: -311738.0 ( -159.54 by residue)
QMean score : 0.311
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