Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGY-YAADQWVFGLGLCKMISWMYLVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMII------RTLQHCKNEKKN--KAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL
5C1M Chain:A ((23-294))--------------------------------------------LYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIP---ETTFQTVSWHFCIA---LGYTNSCLNPVLYAFLDENFKRCF---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -276566 for 1937 contacts (-142.8/contact) +
2D Compatibility (PS) -26288 + (NN) -2599 + (LL) 5696
1D Compatibility (HY) -32000 + (ID) 4150
Total energy: -335907.0 ( -173.42 by residue)
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_5C1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C1M-query.scw
PDB file : Tito_Scwrl_5C1M.pdb: