Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYPLTLEMDLENLEDLFWELDRLDNYNDTSLVENHLCPATEGPLMASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLLVFILPFAVAEGSV-GWVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRLLSIHITCGTIWLVGFLLALPEILFAKVSQGHHNNSLPRCTFSQENQAETHAWF---TSRFLYHVAGFLLPMLVMGWCY-----VGVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLARLKAVDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKLGCTGPASLCQLFPSWRRSSLSESENATSLTTF |
4RWA Chain:A ((122-406)) | --------------------------------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVP-IMVMAVTRPRDGAVV--CML----QFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL-------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPL------VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263005 for 2026 contacts (-129.8/contact) +
2D Compatibility (PS) -27054 + (NN) -4586 + (LL) 5656
1D Compatibility (HY) -31600 + (ID) 3800
Total energy: -324389.0 ( -160.11 by residue)
QMean score : 0.322
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