Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVAPLRGALLLWQLLAAGGAALEIGRFDPERGRGAAPCQAVEIPMCRGIGYNLTRMPNLLGHTSQGEAAAELAEFAPLVQYGCHSHLRFFLCSLYAPMCTDQVSTPIPACRPMCEQARLRCAPIMEQFNFGWPDSLDCARLPTRNDPHALCMEAPENATAGPAEPHKGLGMLPVAPRPARPPGDLGPGAGGSGTCE-------NPEKFQYVEKSRSCAPRCGPGVEVFWSRRDKDFALVWMAVWSALCFFSTAFTVLTFLLE-PHRFQYPERPIIFLSMCYNVYSLAFLIRAVAGAQ-SVACDQEAGALYVIQEGLENTGCTLVFLLLYYFGMASSLWWVVLTLTW---FLAAGKKWGHEAIEAHGSYFHMAAWGLPALKTIVILTLRKVAGDELTGLCYVASTDAAALTGFVLVPLSGYLVLGSSFLLTGFVALFHIRKIMKTGGTNTE-KLEKLMVKIGVFSILYTVPATCVIVCYVYERLNMDFWRLRATEQP-CAAAAGPGGRRDCSLPGGSV---PTVAVFMLKIFMSLVVGITSGVWVWSSKTFQTWQSLCYRKIAAGRARAKACRAPGSYGRGTHCHYKAPTVVLHMTKTDPSLENPTHL |
| 4N4W Chain:A ((110-466)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGQCEVPLVRTDNPKS--WYEDVEGCGIQCQN--PLFTEAEHQDMH-SYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTT--YQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKS--NHPGLLSESKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQA-------------DCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253016 for 2527 contacts (-100.1/contact) +
2D Compatibility (PS) -32821 + (NN) -9331 + (LL) 12904
1D Compatibility (HY) -31200 + (ID) 4750
Total energy: -318214.0 ( -125.93 by residue)
QMean score : 0.298
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